The detailed information of tRNA gene sequence


Sequence ID>SRA1004138
Genome IDSRR002328.167224
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 126
End posion on genome 201
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position
ctatctgttt
tRNA gene sequence
GGGTTCTTAGCTCAGCTGGTAGAGCAGCGGACTCTTAATCCGTAGGTCGCGAGTTCGAAT
CTCGCAGAACCCACCA
Downstream region at tRNA end position
gtcaagcctt
Secondary structure (Cloverleaf model)
>SRA1004138	Lys	CTT
                   t      ACCA gtcaagcctt
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A
                     C - G
                     T - A          T A
                    T     C G C T C     A
      C G A        A      | | | | |     G
    T       C T C G       G C G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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