The detailed information of tRNA gene sequence


Sequence ID>SRA1004139
Genome IDSRR002328.167991
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 148
End posion on genome 72
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcggaccctg
tRNA gene sequence 
GGCTTGGTAGCTCAGCTGGTTAGAGCGGTGGATTCATAACCCACAGGTCGGCGGTTCAAG
TCCGCCCCAAGCCACCA
Downstream region at tRNA end position 
gggtccggcg
Secondary structure (Cloverleaf model)
>SRA1004139	Met	CAT
                   g      ACCA gggtccggcg
                     G - C
                     G - C
                     C - G
                     T - A
                     T - A
                     G - C
                     G - C          T G
                    T     C C G C C     A
      C G A        A      | | | | |     A
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    G - C
                    T - A
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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