The detailed information of tRNA gene sequence


Sequence ID>SRA1004145
Genome IDSRR002328.169464
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 256
End posion on genome 180
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ccgatcatgt
tRNA gene sequence 
CGGGGAGTGGCGCAGCCTGGTAGCGCATCTGCTTTGGGAGCAGAGGGTCGCAGGTTCGAA
TCCTGTCTCCCCGACCA
Downstream region at tRNA end position 
tacaaatcaa
Secondary structure (Cloverleaf model)
>SRA1004145	Pro	TGG
                   t      ACCA tacaaatcaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T G T C C     A
      C G A        G      + | | | |     G
    C       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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