The detailed information of tRNA gene sequence


Sequence ID>SRA1004147
Genome IDSRR002328.169807
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 239
End posion on genome 163
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
gcctgtccac
tRNA gene sequence 
GCGCCCGTAGCTCAGCTGGATAGAGCGCCGGCCTTCGAAGCCGGATGTCGTAAGTTCGAA
TCTTACCGGGCGTGCAA
Downstream region at tRNA end position 
atagctctgg
Secondary structure (Cloverleaf model)
>SRA1004147	Arg	TCG
                   c      GCAA atagctctgg
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C A T T C     A
      C G A        A      | | | | |     G
    T       C T C G       G T A A G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     ATGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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