The detailed information of tRNA gene sequence


Sequence ID>SRA1004151
Genome IDSRR002328.173394
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 57
End posion on genome 144
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aaccgcatca
tRNA gene sequence 
GGAGAGATGGCAGAGTGGTCGAATGTACCTGACTCGAAATCAGGCGTACCGTAAGGTACC
GAGGGTTCGAATCCCTCTCTCTCCTCCA
Downstream region at tRNA end position 
gaaatggccc
Secondary structure (Cloverleaf model)
>SRA1004151	Ser	CGA
                   a      TCCA gaaatggccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G A G G G     C
    G         | | +                 T T
    T       A T G T
      C G A        A     CGTACCGTAAGGTACC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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