The detailed information of tRNA gene sequence


Sequence ID>SRA1004158
Genome IDSRR002328.176774
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 145
End posion on genome 221
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acaggcttga
tRNA gene sequence 
GGCGCTTTAGCTCAGCCGGTTAGAGCGACGGAATCATAATCCGCAGGTCCGGGGTTCGAA
TCCCTGAAGCGCCACCA
Downstream region at tRNA end position 
aaataatann
Secondary structure (Cloverleaf model)
>SRA1004158	Met	CAT
                   a      ACCA aaataatann
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A
                     T - A          T A
                    T     G T C C C     A
      C G A        A      | + | | |     G
    C       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    A   C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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