The detailed information of tRNA gene sequence


Sequence ID>SRA1004161
Genome IDSRR002328.177289
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 141
End posion on genome 214
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
cgtcgggcac
tRNA gene sequence 
GCTCGCATAGCTCAGTCGGTAGAGCACATCCTTGGTAAGGATGAGGTCATCGGTTCGATC
CCGATTGCGAGCTCtg
Downstream region at tRNA end position 
ttcggcctgc
Secondary structure (Cloverleaf model)
>SRA1004161	Thr	GGT
                   c      TCtg ttcggcctgc
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C
                     C - G
                     A - T          C T
                    T     T A G C C     A
      T G A        A      | | | | |     G
    C       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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