The detailed information of tRNA gene sequence


Sequence ID>SRA1004162
Genome IDSRR002328.177993
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 90
End posion on genome 1
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tcacccctgc
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTCGAAAGCACCGCACTCGAAATGCGACGTACCCGCAAGGGTA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1004162	Ser	CGA
                   c      GCCA nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        A     CGTACCCGCAAGGGTACC
                    C   A
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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