The detailed information of tRNA gene sequence


Sequence ID>SRA1004163
Genome IDSRR002328.178206
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 224
End posion on genome 140
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
aaaattgaat
tRNA gene sequence 
GCCCATGTGGCGGAATTGGTAGACGCAGCAGACTCAAAATCTGCCATTCGCAAGGGTGTG
AAGGTTCGATTCCTTTCGTGGGCACgc
Downstream region at tRNA end position 
taagcaattt
Secondary structure (Cloverleaf model)
>SRA1004163	Leu	CAA
                   t      ACgc taagcaattt
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     T + G
                     G - C          T T
                    T     T T T C C     A
      T A A        G      + | | | |     G
    T       G G C G       G A A G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CATTCGCAAGGGTGT
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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