The detailed information of tRNA gene sequence


Sequence ID>SRA1004164
Genome IDSRR002328.178297
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 160
End posion on genome 232
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
catgagcaca
tRNA gene sequence 
TCCGCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCCGGGTTCAATTC
CCGGTCGCGGAGCtt
Downstream region at tRNA end position 
tttttttctt
Secondary structure (Cloverleaf model)
>SRA1004164	Asp	GTC
                   a      GCtt tttttttctt
                     T - A
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     A - T          T T
                    T     G G C C C     A
      T G A        A      | | | | |     A
    G       T A T G       C C G G G     C
    G       + | | +                 T T
    T       G T A T
      T A          C     AGAC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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