The detailed information of tRNA gene sequence


Sequence ID>SRA1004165
Genome IDSRR002328.179585
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 27
End posion on genome 102
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ggcggggcct
tRNA gene sequence 
AGGGGTATAGCTCAGTTGGTAGAGCATCGGTCTCCAAAACCGAGGGTCGTGGGTTCGAGT
CCCCCTGCCCCTGCCA
Downstream region at tRNA end position 
ggccgccgca
Secondary structure (Cloverleaf model)
>SRA1004165	Trp	CCA
                   t      GCCA ggccgccgca
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T G
                    T     C C C C C     A
      T G A        A      |   | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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