The detailed information of tRNA gene sequence


Sequence ID>SRA1004170
Genome IDSRR002328.181333
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 70
End posion on genome 146
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
gtccgatcaa
tRNA gene sequence 
GCGCCCGTAGCTCAGCTGGATAGAGCACGAGACTTCTAATCTTGAGGCCGCTGGTTCGAA
TCCAGCCGGGCGCGCCA
Downstream region at tRNA end position 
ttttgctgac
Secondary structure (Cloverleaf model)
>SRA1004170	Arg	TCT
                   a      GCCA ttttgctgac
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C G A C C     A
      C G A        A      | | | | |     G
    T       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGCC
                    C - G
                    G + T
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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