The detailed information of tRNA gene sequence


Sequence ID>SRA1004178
Genome IDSRR002328.185789
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 69
End posion on genome 144
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
aagcgaaatt
tRNA gene sequence 
GGGGGTATAGCTCAGCTGGGAGAGCGCTTGCATGGCATGCAAGAGGTCAGCGGTTCGATC
CCGCTTACCTCCACCA
Downstream region at tRNA end position 
gtgccggttg
Secondary structure (Cloverleaf model)
>SRA1004178	Ala	GGC
                   t      ACCA gtgccggttg
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T - A
                     A - T          C T
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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