The detailed information of tRNA gene sequence


Sequence ID>SRA1004183
Genome IDSRR002328.187011
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 3
End posion on genome 75
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position 
nnnnnnnnct
tRNA gene sequence 
TGGGGTATGGTGTAATTGGCAACACAGCGGTTTCTGGTACCGCCATTCTAGGTTCGAGTC
CTGGTACCCCAGCgg
Downstream region at tRNA end position 
aaaaagttcg
Secondary structure (Cloverleaf model)
>SRA1004183	Gln	CTG
                   t      GCgg aaaaagttcg
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T G
                    T     G G T C C     A
      T A A        G      | + | | |     G
    T       T G T G       C T A G G     C
    G       | | | |                 T T
    G       A C A C
      C A          A     CATT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  T       T
                  T       G
                    C T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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