The detailed information of tRNA gene sequence


Sequence ID>SRA1004186
Genome IDSRR002328.189655
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 106
End posion on genome 33
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
atttgacgac
tRNA gene sequence 
GGCGCGATAGCAAAGCGGTTATGCAACGGATTGCAAATCCGTGTAGCCCGGTTCGACTCC
GGGTCGCGCCTCCA
Downstream region at tRNA end position 
cccattgatc
Secondary structure (Cloverleaf model)
>SRA1004186	Cys	GCA
                   c      TCCA cccattgatc
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     A - T          T C
                    T     G G G C C     A
        G A        A      | | | | |     G
      C     A A C G       C C C G G     C
      G       | | |                 T T
      G     A T G C
        T T        A     GTAG
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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