The detailed information of tRNA gene sequence


Sequence ID>SRA1004187
Genome IDSRR002328.190178
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 182
End posion on genome 108
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
atccgaatac
tRNA gene sequence 
GGGCTTGTAGCTCAGGTGGTTAGAGCGCTACACTGATAATGTAGAGGTCCGTGGTTCGAG
TCCACGCAGGCCCACtt
Downstream region at tRNA end position 
ggttcgccgg
Secondary structure (Cloverleaf model)
>SRA1004187	Ile	GAT
                   c      ACtt ggttcgccgg
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A
                     G - C          T G
                    T     G C A C C     A
      G G A        A      | | | | |     G
    T       C T C G       C G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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