The detailed information of tRNA gene sequence


Sequence ID>SRA1004188
Genome IDSRR002328.190380
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 230
End posion on genome 156
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cacaaaaccc
tRNA gene sequence 
GGCGGGGTAGCTCAGCTGGTTAGAGCACAGGATTCATAACCCTGAGGTCGGCGGTTCGAG
CCCGCCTCCCGCTACgt
Downstream region at tRNA end position 
cgagaaccgt
Secondary structure (Cloverleaf model)
>SRA1004188	Met	CAT
                   c      ACgt cgagaaccgt
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          C G
                    T     C C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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