The detailed information of tRNA gene sequence


Sequence ID>SRA1004194
Genome IDSRR002328.191744
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 157
End posion on genome 233
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttaactccga
tRNA gene sequence 
CGCGGAGTAGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGCTGGTTCAAA
TCCAGTCTCCGCCACCA
Downstream region at tRNA end position 
aatgtaacaa
Secondary structure (Cloverleaf model)
>SRA1004194	Met	CAT
                   a      ACCA aatgtaacaa
                     C   C
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T G A C C     A
      C G A        A      + | | | |     A
    C       C G A G       G C T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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