The detailed information of tRNA gene sequence


Sequence ID>SRA1004195
Genome IDSRR002328.192054
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 282
End posion on genome 208
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
nnnnnnnntg
tRNA gene sequence 
GTGGCTATAGCTCAGTTGGTAGAGCCCCGGGTTGTGATCTCGGTTGTCGAGGGTTCGAGT
CCCTTTAGCCACCCAt
Downstream region at tRNA end position 
ttattcatcc
Secondary structure (Cloverleaf model)
>SRA1004195	His	GTG
                   g      CCAt ttattcatcc
                     G - C
                     T - A
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T          T G
                    T     T T C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          C     TTGTC
                    C - G
                    C - G
                    G - C
                    G + T
                    G - C
                  T       T
                  T       A
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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