The detailed information of tRNA gene sequence


Sequence ID>SRA1004198
Genome IDSRR002328.193790
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 141
End posion on genome 215
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttttgaagaa
tRNA gene sequence 
GGGCCTATAGCTCAGTTGGTTAGAGCACCTGACTCATAATCAGGTGGTCCCTGGTTCGAG
CCCAGGTGGGCCCACtg
Downstream region at tRNA end position 
aatactggaa
Secondary structure (Cloverleaf model)
>SRA1004198	Met	CAT
                   a      ACtg aatactggaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          C G
                    T     G G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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