The detailed information of tRNA gene sequence


Sequence ID>SRA1004199
Genome IDSRR002328.194005
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 227
End posion on genome 156
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
aaagctgagt
tRNA gene sequence 
CGGGGTGTAGTATATCGGTAGTATATCTGTTTTGGGAACAGAAGGGCAGGGTTCGATTCC
CTGCACCCCGACtc
Downstream region at tRNA end position 
agctttgaag
Secondary structure (Cloverleaf model)
>SRA1004199	Pro	TGG
                   t      ACtc agctttgaag
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     G T C C C     A
        T A        A      | | | | |     G
      C     T A T G       C A G G G     C
      G     + | | +                 T T
      G     G T A T
        T A        A     AGGG
                    T - A
                    C - G
                    T - A
                    G - C
                    T - A
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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