The detailed information of tRNA gene sequence


Sequence ID>SRA1004208
Genome IDSRR002328.198547
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 50
End posion on genome 125
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
tctgggaaat
tRNA gene sequence 
GCTGGCGTAGCTCAATCGGTAGAGCACCTGTTTTGTAAACAGGCGGTTAGCGGTTCAAGT
CCGCTCGCTAGCTCGA
Downstream region at tRNA end position 
gaccgaggtt
Secondary structure (Cloverleaf model)
>SRA1004208	Thr	TGT
                   t      TCGA gaccgaggtt
                     G - C
                     C - G
                     T - A
                     G + T
                     G - C
                     C - G
                     G - C          T G
                    T     T C G C C     A
      T A A        A      | | | | |     A
    C       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     CGGTT
                    C - G
                    C - G
                    T - A
                    G - C
                    T - A
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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