The detailed information of tRNA gene sequence


Sequence ID>SRA1004210
Genome IDSRR002328.200464
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 119
End posion on genome 194
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
tcaattagat
tRNA gene sequence 
GCCGGTTTAGCTCAGATGGTAGAGCAGCGGTTTTGTAAACCGAAGGTCGCGGGTTCGATT
CCTGCAACCGGCACCA
Downstream region at tRNA end position 
caatttcaac
Secondary structure (Cloverleaf model)
>SRA1004210	Thr	TGT
                   t      ACCA caatttcaac
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     T - A
                     T - A          T T
                    T     C G T C C     A
      A G A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G   A
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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