The detailed information of tRNA gene sequence


Sequence ID>SRA1004215
Genome IDSRR002328.204948
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 5
End posion on genome 79
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
nnnnnnttaa
tRNA gene sequence 
GCCTCGTTAGCTCAGCGGTAGAGCAACTCCTTTACACGGAGAAGGCCAGCGGTTCAATCC
CGTTACGAGGTACCA
Downstream region at tRNA end position 
tttcaattaa
Secondary structure (Cloverleaf model)
>SRA1004215	Val	TAC
                   a      ACCA tttcaattaa
                     G + T
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C
                     T - A          C T
                    T     T T G C C     A
        G A        A      | + | | |     A
      C     C T C G       A G C G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGCC
                    A   A
                    C - G
                    T - A
                    C - G
                    C - G
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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