The detailed information of tRNA gene sequence


Sequence ID>SRA1004218
Genome IDSRR002328.205746
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 200
End posion on genome 111
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tttggcggct
tRNA gene sequence 
GGAGAGATGCCCGAGTGGTTGAAGGGAACAGTCTTGAAAACTGTCGTGCCGGCAACGGTA
CCCAGGGTTCGAATCCCTGTCTCTCCGCCA
Downstream region at tRNA end position 
attcagaggc
Secondary structure (Cloverleaf model)
>SRA1004218	Ser	TGA
                   t      GCCA attcagaggc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G C C C       C A G G G     C
    G         | | |                 T T
    T       A G G G
      T G A        A     CGTGCCGGCAACGGTACC
                    A - T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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