The detailed information of tRNA gene sequence


Sequence ID>SRA1004219
Genome IDSRR002328.205767
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 94
End posion on genome 169
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ctgaaggttt
tRNA gene sequence 
GGGGATGTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCGCAGGTTCGAAT
CCTGTCATCTCCACCA
Downstream region at tRNA end position 
atgaaaaacc
Secondary structure (Cloverleaf model)
>SRA1004219	Ala	TGC
                   t      ACCA atgaaaaacc
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T G T C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     ATGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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