The detailed information of tRNA gene sequence


Sequence ID>SRA1004221
Genome IDSRR002328.207479
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 26
End posion on genome 102
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taaggatgtt
tRNA gene sequence 
GTCGGGGTAGCTCAGCTGGTTAGAGCATCGGATTCATAACCCGAAGGTCGGCAGTTCAAG
TCTGCTTCCCGATACAA
Downstream region at tRNA end position 
aaaaccccct
Secondary structure (Cloverleaf model)
>SRA1004221	Met	CAT
                   t      ACAA aaaaccccct
                     G + T
                     T - A
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T G
                    T     T C G T C     A
      C G A        A      + | | | |     A
    T       C T C G       G G C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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