The detailed information of tRNA gene sequence


Sequence ID>SRA1004229
Genome IDSRR002328.212721
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 118
End posion on genome 205
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atgaataact
tRNA gene sequence 
GGAGCCATGGCAGAGTGGCCGATCGCACATCGTTGGAAACGATGAGAGGGTAAAACCTCC
GTGAGTTCGAATCTCACTGGCTCTTCCA
Downstream region at tRNA end position 
gtacaatgcc
Secondary structure (Cloverleaf model)
>SRA1004229	Ser	GGA
                   t      TCCA gtacaatgcc
                     G + T
                     G - C
                     A - T
                     G - C
                     C - G
                     C - G
                     A - T          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G A C G       G T G A G     C
    G       +   | |                 T T
    C       T C G C
      C G A        A     AGAGGGTAAAACCTCC
                    C - G
                    A - T
                    T - A
                    C - G
                    G - C
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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