The detailed information of tRNA gene sequence


Sequence ID>SRA1004230
Genome IDSRR002328.212969
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 238
End posion on genome 147
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
acgagtcaga
tRNA gene sequence 
GGAGGGATGGCCGAGAGGCTGAAGGCACCGGTTTGCTAAACCGGCATAGGGGGGTCAACC
TCTATCGCGGGTTCGAATCCCGCTTCCTCCGCtc
Downstream region at tRNA end position 
cgcgggtccg
Secondary structure (Cloverleaf model)
>SRA1004230	Ser	GCT
                   a      GCtc cgcgggtccg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G + T
                     A - T          T A
                    T     C G C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     CATAGGGGGGTCAACCTCTATC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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