The detailed information of tRNA gene sequence


Sequence ID>SRA1004232
Genome IDSRR002328.214559
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 189
End posion on genome 115
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
caatctctcc
tRNA gene sequence 
GGGCGGTTAGCTCAGCGGTAGAGCACTGCTTTCACACGGCAGGGGTCACAGGTTCAAGCC
CTGTACCGCCCACCA
Downstream region at tRNA end position 
aatccagttt
Secondary structure (Cloverleaf model)
>SRA1004232	Val	CAC
                   c      ACCA aatccagttt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          C G
                    T     T G T C C     A
        G A        A      | | | | |     A
      C     C T C G       A C A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    T + G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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