The detailed information of tRNA gene sequence


Sequence ID>SRA1004233
Genome IDSRR002328.214609
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 115
End posion on genome 39
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ctcggccatg
tRNA gene sequence 
GTCCCGTTCGTCTAGAGGCCTAGGACACCACCCTCTCACGGCGGGAAACAGGGGTTCGAA
TCCCCTACGGGGCACCA
Downstream region at tRNA end position 
tttggcggct
Secondary structure (Cloverleaf model)
>SRA1004233	Glu	CTC
                   g      ACCA tttggcggct
                     G - C
                     T + G
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     T C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     GAAAC
                    C - G
                    C - G
                    A   C
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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