The detailed information of tRNA gene sequence


Sequence ID>SRA1004245
Genome IDSRR002328.221284
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 167
End posion on genome 242
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gcaacccctt
tRNA gene sequence 
GGATCGGTGGTGCAGCGGTTAGCATACCCGCCTGTCACGCGGGTGGTCGCGGGTTCAAAT
CCCGTCCGATCCGCCA
Downstream region at tRNA end position 
gcaataccct
Secondary structure (Cloverleaf model)
>SRA1004245	Asp	GTC
                   t      GCCA gcaataccct
                     G - C
                     G - C
                     A - T
                     T - A
                     C - G
                     G - C
                     G - C          T A
                    T     T G C C C     A
      C G A        G      + | | | |     A
    G       C G T G       G C G G G     C
    G       | | | +                 T T
    T       G C A T
      T A          A     TGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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