The detailed information of tRNA gene sequence


Sequence ID>SRA1004246
Genome IDSRR002328.221410
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 226
End posion on genome 151
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
caagcccgct
tRNA gene sequence 
GCGCCCGTAGCTCAATGGATAGAGTACTGCCCTCCGAAGGCAGGGGTTGCAGGTTCGATA
CCTGCCGGGCGCACCA
Downstream region at tRNA end position 
ccctgtctgt
Secondary structure (Cloverleaf model)
>SRA1004246	Arg	CCG
                   t      ACCA ccctgtctgt
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          A T
                    T     C G T C C     A
      T A A        A      | | | | |     G
    G       C T C G       G C A G G     C
    G       | | | +                 T T
    A       G A G T
      T A          A     GGGTT
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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