The detailed information of tRNA gene sequence


Sequence ID>SRA1004253
Genome IDSRR002328.224472
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 125
End posion on genome 199
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
acgggcccat
tRNA gene sequence 
CGGGATGTAGCTCAGCTTGGTAGAGTGCTCGGTTTGGGGCCGAGATGTCGCAGGTTCGAC
TCCTGTCATCCCGACag
Downstream region at tRNA end position 
aaactgcaca
Secondary structure (Cloverleaf model)
>SRA1004253	Pro	TGG
                   t      ACag aaactgcaca
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T C
                    T     T G T C C     A
      C G A        A      + | | | |     G
    T       C T C G       G C A G G     C
    T       | | | +                 T T
    G       G A G T
      G T A        G     ATGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  T       G
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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