The detailed information of tRNA gene sequence


Sequence ID>SRA1004256
Genome IDSRR002328.226975
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 212
End posion on genome 136
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttctcccact
tRNA gene sequence 
GGGGTGGTAGTTAAGTTGGTTATAACGCCGGCCTGTCACGCCGGAGGCCGCGGGTTCGAG
TCCCGTCCACCCCGCCA
Downstream region at tRNA end position 
cgatgatgcg
Secondary structure (Cloverleaf model)
>SRA1004256	Asp	GTC
                   t      GCCA cgatgatgcg
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       A T T G       G C G G G     C
    G       | | | |                 T T
    G       T A A C
      T T A        G     AGGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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