The detailed information of tRNA gene sequence


Sequence ID>SRA1004258
Genome IDSRR002328.228318
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 10
End posion on genome 97
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
nctcgacccc
tRNA gene sequence 
GGAACCGTGTCCGAGCGGCCGAAGGTGCAACTCTCGAAAAGTTGTGTGGGTGAGAGCCCA
CCGTGGGTTCAAATCCCACCGGTTCCGCac
Downstream region at tRNA end position 
aggagcagcc
Secondary structure (Cloverleaf model)
>SRA1004258	Ser	CGA
                   c      GCac aggagcagcc
                     G - C
                     G - C
                     A - T
                     A - T
                     C - G
                     C - G
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G C C T       G T G G G     C
    G         | |                   T T
    C       A G G T
      C G A        G     TGTGGGTGAGAGCCCACC
                    C - G
                    A - T
                    A - T
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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