The detailed information of tRNA gene sequence


Sequence ID>SRA1004264
Genome IDSRR002328.231206
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 114
End posion on genome 206
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tctaattatt
tRNA gene sequence 
GGAAACGTGACCGAGTGGCCGAAGGTGCTCCCCTGCTAAGGGAGTATGGGGTGTAGAGCC
TCATCGAGAGTTCGAATCTCTCCGTTTCCGCCA
Downstream region at tRNA end position 
agaccaaacg
Secondary structure (Cloverleaf model)
>SRA1004264	Ser	GCT
                   t      GCCA agaccaaacg
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     C - G
                     G - C          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G C C A       G A G A G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TATGGGGTGTAGAGCCTCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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