The detailed information of tRNA gene sequence


Sequence ID>SRA1004267
Genome IDSRR002328.233600
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 157
End posion on genome 79
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ggaagttatt
tRNA gene sequence 
CGGTGTGTAGGCTAGCCCGGTCGAAGTCGTCTGCTTTGGGAGCAGAAAACCGCAGGTTCA
AATCCTGCCATACCGACCA
Downstream region at tRNA end position 
aatgggcatc
Secondary structure (Cloverleaf model)
>SRA1004267	Pro	TGG
                   t      ACCA aatgggcatc
                     C - G
                     G - C
                     G - C
                     T - A
                     G + T
                     T - A
                     G - C          T A
                    T     C G T C C     A
    C C G A        A      | | | | |     A
  C         T C G G       G C A G G     C
  G         | | + |                 T T
  G         A G T C
    T C G A        G     AAACC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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