The detailed information of tRNA gene sequence


Sequence ID>SRA1004272
Genome IDSRR002328.239435
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 39
End posion on genome 124
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
gttggtatct
tRNA gene sequence 
GGAGAGATATCCAAGTGGCTAAAGGAGGCAGACTGTAAATCTGTTGGCTTCGGTCTTCGA
AGGTTCGAATCCTTCTCTCTCCACCA
Downstream region at tRNA end position 
cttcaaatcc
Secondary structure (Cloverleaf model)
>SRA1004272	Tyr	GTA
                   t      ACCA cttcaaatcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T T C C     A
      T G A        A      | | | | |     G
    G       A C C T       G A A G G     C
    G         | | |                 T T
    C       A G G A
      T A A        G     TGGCTTCGGTCTTC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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