The detailed information of tRNA gene sequence


Sequence ID>SRA1004282
Genome IDSRR002328.245309
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 135
End posion on genome 210
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
accatttcac
tRNA gene sequence 
GGGGCCTTAGCTCAGTTGGGAGAGCGCTAGCTTTGCAAGCTTGAGGTCATCGGTTCGATC
CCGATAGGCTCCACCA
Downstream region at tRNA end position 
ggcttgcagc
Secondary structure (Cloverleaf model)
>SRA1004282	Ala	TGC
                   c      ACCA ggcttgcagc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     T - A          C T
                    T     T A G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T   T
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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