The detailed information of tRNA gene sequence


Sequence ID>SRA1004283
Genome IDSRR002328.246714
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 179
End posion on genome 253
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
atggggattt
tRNA gene sequence 
GGGCGGTTAGCTCAGCGGTAGAGCACTACCTTGACATGGTAGGGGTCGGGGGTTCGAAAC
CCTCACCGCCCACCA
Downstream region at tRNA end position 
ttaaannnnn
Secondary structure (Cloverleaf model)
>SRA1004283	Val	GAC
                   t      ACCA ttaaannnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          A A
                    T     C T C C C     A
        G A        A      | + | | |     G
      C     C T C G       G G G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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