The detailed information of tRNA gene sequence


Sequence ID>SRA1004287
Genome IDSRR002328.249188
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 82
End posion on genome 6
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
cggtcccggt
tRNA gene sequence 
CGGGGAGTAGCTCAGCCTGGTAGAGCACTGTCTTCGGGAGGCAGGGGCCGGAGGTTCGAA
TCCTCTCTCCCCGACCA
Downstream region at tRNA end position 
attatnnnnn
Secondary structure (Cloverleaf model)
>SRA1004287	Pro	CGG
                   t      ACCA attatnnnnn
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    C       C T C G       G G A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGCC
                    C - G
                    T - A
                    G - C
                    T + G
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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