The detailed information of tRNA gene sequence


Sequence ID>SRA1004289
Genome IDSRR002328.251807
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 82
End posion on genome 158
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcttgggctc
tRNA gene sequence 
GGCGCTTTAGCTCAGTCGGTTAGAGCGATGGAATCATAATCCACAGGTCCGCGGTTCGAA
TCCGTGAAGCGCCACCA
Downstream region at tRNA end position 
aatccgaagg
Secondary structure (Cloverleaf model)
>SRA1004289	Met	CAT
                   c      ACCA aatccgaagg
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A
                     T - A          T A
                    T     G T G C C     A
      T G A        A      | + | | |     G
    C       C T C G       C G C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    A   C
                    T - A
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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