The detailed information of tRNA gene sequence


Sequence ID>SRA1004295
Genome IDSRR002328.254591
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 175
End posion on genome 103
Amino Acid Val
Anticodon AAC
Upstream region at tRNA start position 
aatatcggaa
tRNA gene sequence 
GCAGTCGTGGTGTAGTGGCTATCACATCTCCTTAACACGGAGAAGGTCATGGGTTCAATC
CCCATCGATTGTAttt
Downstream region at tRNA end position 
ttttttagcg
Secondary structure (Cloverleaf model)
>SRA1004295	Val	AAC
                   a      Attt ttttttagcg
                     G + T
                     C - G
                     A - T
                     G + T
                     T - A
                     C - G
                     G - C          C T
                    T     T A C C C     A
      T G A        G      | | | | |     A
    G       T G T G       A T G G G     C
    G         | | |                 T T
    C       T C A C
      T A          A     AGGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    C - G
                  T       C
                  T       A
                    A A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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