The detailed information of tRNA gene sequence


Sequence ID>SRA1004299
Genome IDSRR002328.256816
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 56
End posion on genome 132
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctaaaagaaa
tRNA gene sequence 
GGGCCTATAGCTCAGTTGGTTAGAGCACCTGACTCATAATCAGGTGGTCCTAGGTTCAAA
TCCTAGTGGGCCCACCA
Downstream region at tRNA end position 
taaaatagtc
Secondary structure (Cloverleaf model)
>SRA1004299	Met	CAT
                   a      ACCA taaaatagtc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T A
                    T     G A T C C     A
      T G A        A      | | | | |     A
    T       C T C G       C T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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