The detailed information of tRNA gene sequence


Sequence ID>SRA1004307
Genome IDSRR002328.262635
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 163
End posion on genome 86
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcaccaccaa
tRNA gene sequence 
CGCGGGGTGGAGCAGCCCGGTAGTCTCGTCAGGCTCATAACCTGAAGGTCATAGGTTCAA
ATCCTATCCCCGCAACCA
Downstream region at tRNA end position 
aataataaac
Secondary structure (Cloverleaf model)
>SRA1004307	Met	CAT
                   a      ACCA aataataaac
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T A T C C     A
    C C G A        G      | | | | |     A
  C         C G A G       A T A G G     C
  G           | | |                 T T
  G         T C T C
    T A G          G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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