The detailed information of tRNA gene sequence


Sequence ID>SRA1004312
Genome IDSRR002328.266844
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 193
End posion on genome 269
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acggtagtgt
tRNA gene sequence 
CGCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGTAGGTTCAAA
TCCTACCCCCGCAACCA
Downstream region at tRNA end position 
acaacaaacg
Secondary structure (Cloverleaf model)
>SRA1004312	Met	CAT
                   t      ACCA acaacaaacg
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A T C C     A
      C G A        G      | | | | |     A
    C       C G A G       G T A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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