The detailed information of tRNA gene sequence


Sequence ID>SRA1004317
Genome IDSRR002328.271013
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 151
End posion on genome 240
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttttcatgcg
tRNA gene sequence 
GGAAGCGTGGCCGAGTGGTTTAAGGCTGCAGTCTTGAAAACTGCCGAGGGGGCAACTCCT
CCGTGAGTTCGAATCTCACCGCTTCCACCA
Downstream region at tRNA end position 
ccgcaccctg
Secondary structure (Cloverleaf model)
>SRA1004317	Ser	TGA
                   g      ACCA ccgcaccctg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G A G     C
    G         | | |                 T T
    T       A G G C
      T T A        T     CGAGGGGGCAACTCCTCC
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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