The detailed information of tRNA gene sequence


Sequence ID>SRA1004318
Genome IDSRR002328.273095
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 163
End posion on genome 87
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gtaggtggaa
tRNA gene sequence 
GGGGCGTTAGCTCAGTTGGTTAGAGCAGAGGACTCATAATCCTTTGGTCGTAGGTTCAAG
TCCTACACGCCCTACCA
Downstream region at tRNA end position 
tgctggatat
Secondary structure (Cloverleaf model)
>SRA1004318	Met	CAT
                   a      ACCA tgctggatat
                     G + T
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A          T G
                    T     C A T C C     A
      T G A        A      | | | | |     A
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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