The detailed information of tRNA gene sequence


Sequence ID>SRA1004326
Genome IDSRR002328.278192
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 195
End posion on genome 119
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgcagatgaa
tRNA gene sequence 
GGGGCGTTAGCTCAGTTGGTTAGAGCAGAGGACTCATAATCCTTTGGTCCACGGTTCAAG
TCCGTGACGCCCTACCA
Downstream region at tRNA end position 
tgctggataa
Secondary structure (Cloverleaf model)
>SRA1004326	Met	CAT
                   a      ACCA tgctggataa
                     G + T
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A          T G
                    T     G T G C C     A
      T G A        A      | | | | |     A
    T       C T C G       C A C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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